Ph.D. in Ingegneria Informatica E Dei Sistemi , 28th cycle (2013-2016)
Ph.D. obtained in 2016
Dissertation:
Optimised Tools for Bioinformatics Analysis and Neuromorphic Computing
Tutors:
Enrico MaciiProfile
Research interests
Scientific branch
(Area 0009 - Industrial and information engineering)
Teaching
Collegi of the PhD programmes
- INGEGNERIA INFORMATICA E DEI SISTEMI, 2022/2023 (39. ciclo)
Politecnico di TORINO
Collegi of the degree programmes
- Collegio di Ingegneria Informatica, del Cinema e Meccatronica. Componente invitato
- Collegio di Pianificazione e Progettazione. Componente
Teachings
Master of Science
- Synthesis and optimization of digital systems. A.A. 2015/16, INGEGNERIA INFORMATICA (COMPUTER ENGINEERING). Collaboratore del corso
Bachelor of Science
- Informatica. A.A. 2013/14, INGEGNERIA AEROSPAZIALE. Collaboratore del corso
- Informatica. A.A. 2014/15, INGEGNERIA AEROSPAZIALE. Collaboratore del corso
Research
Research groups
Research projects
Projects funded by commercial contracts
- Modelli statistici, Data Analytics e Machine Learning , (2022-2023) - Responsabile Scientifico
Commercial Research - “Modelli statistici, data analytics e machine learning (year 2020)”, “Fog computing e opportunistic networking (year 2020)” e “Design e implementazione di funzionalità firmware avanzate (year 2020)” , (2020-2021) - Responsabile Scientifico
Commercial Research - MODELLI STATISTICI, DATA ANALYTICS E MACHINE LEARNING”, “FOG COMPUTING E OPPORTUNISTIC NETWORKING” e “DESIGN E IMPLEMENTAZIONE DI FUNZIONALITÀ FIRMWARE AVANZATE” , (2019-2020) - Responsabile Scientifico
Commercial Research
Supervised PhD students
- Walter Gallego Gomez. Programme in Ingegneria Informatica E Dei Sistemi (cycle 39, 2023-in progress)
- Andrea Pignata. Programme in Ingegneria Informatica E Dei Sistemi (cycle 39, 2023-in progress)
- Michelangelo Barocci. Programme in Ingegneria Informatica E Dei Sistemi (cycle 38, 2023-in progress)
- Riccardo Pignari. Programme in Ingegneria Informatica E Dei Sistemi (cycle 38, 2022-in progress)
- Evelina Forno. Programme in Ingegneria Informatica E Dei Sistemi (cycle 35, 2019-2023)
Thesis: Study and implementation of new computational paradigms exploiting neuromorphic hardware architectures
Publications
Works published during the Ph.D. View all publications in Porto@Iris
- Urgese, Gianvito; Paciello, Giulia; Acquaviva, Andrea; Ficarra, Elisa (2016)
isomiR-SEA: An RNA-Seq analysis tool for miRNAs/isomiRs expression level profiling and miRNA-mRNA interaction sites evaluation. In: BMC BIOINFORMATICS, vol. 17. ISSN 1471-2105
Contributo su Rivista - Urgese, Gianvito; Barchi, Francesco; Macii, Enrico; Acquaviva, Andrea (2015)
Top-down profiling methodology and new Partition and Placement tool to improve Spiking Neural Network simulations on a massively many-core neuromorphic platform. In: 10th SICC International Tutorial Workshop "Topics in nonlinear dynamics". Nonlinear Dynamics in Computational Neuroscience: from Physics and Biology to ICT, Turin (IT), September 7-9, 2015
Contributo in Atti di Convegno (Proceeding) - Causapruno, Giovanni; Urgese, Gianvito; Vacca, Marco; Graziano, Mariagrazia; Zamboni, ... (2015)
Protein Alignment Systolic Array Throughput Optimization. In: IEEE TRANSACTIONS ON VERY LARGE SCALE INTEGRATION (VLSI) SYSTEMS, vol. 23, pp. 68-77. ISSN 1063-8210
Contributo su Rivista - Urgese, Gianvito; Paciello, Giulia; Ficarra, Elisa; Macii, Enrico; Acquaviva, Andrea (2015)
On the relevance of a complete characterisation of miRNAs, isomiRs and miRNA-mRNA interaction sites through miRNA-specific alignment tools. In: RNAi 2015: Short & Long Non-coding RNAs, 10th International Conference & Exhibition, Oxford (UK), 24-26 March 2015
Contributo in Atti di Convegno (Proceeding) - Urgese, Gianvito; Paciello, Giulia; Acquaviva, Andrea; Ficarra, Elisa; Graziano, ... (2014)
Dynamic Gap Selector: A Smith Waterman Sequence Alignment Algorithm with Affine Gap Model Optimisation. In: 2nd International Work-Conference on Bioinformatics and Biomedical Engineering (IWBBIO 2014), Granada, April 7-9 2014, pp. 1347-1358. ISBN: 9788415814849
Contributo in Atti di Convegno (Proceeding) - Urgese, Gianvito; Paciello, Giulia; Isella, C.; Medico, E.; Macii, Enrico; Ficarra, ... (2014)
miR-SEA: miRNA Seed Extension based Aligner Pipeline for NGS Expression Level Extraction. In: 2nd International Work-Conference on Bioinformatics and Biomedical Engineering (IWBBIO 2014), Granada, April 7-9 2014, pp. 1015-1026. ISBN: 9788415814849
Contributo in Atti di Convegno (Proceeding) - Vacca, Marco; Graziano, Mariagrazia; Wang, JUAN CHI; Cairo, Fabrizio; Causapruno, ... (2014)
NanoMagnet Logic: an Architectural Level Overview. In: Field Coupled Nanocomputing / S.N., Berlin, Springer, pp. 223-256. ISBN: 978-3-662-43722-3
Contributo in Volume