Ph.D. in Ingegneria Informatica E Dei Sistemi , 28th cycle (2013-2016)
Ph.D. obtained in 2016
Dissertation:
Optimised Tools for Bioinformatics Analysis and Neuromorphic Computing
Tutors:
Enrico MaciiProfile
Research interests
Scientific branch
(Area 0009 - Industrial and information engineering)
Teaching
Collegi of the PhD programmes
- INGEGNERIA INFORMATICA E DEI SISTEMI, 2023/2024 (40. ciclo)
Politecnico di TORINO - INGEGNERIA INFORMATICA E DEI SISTEMI, 2022/2023 (39. ciclo)
Politecnico di TORINO
Collegi of the degree programmes
- Collegio di Ingegneria Informatica, del Cinema e Meccatronica. Componente invitato
- Collegio di Pianificazione e Progettazione. Componente
Teachings
Master of Science
- Synthesis and optimization of digital systems. A.A. 2015/16, INGEGNERIA INFORMATICA (COMPUTER ENGINEERING). Collaboratore del corso
Bachelor of Science
- Informatica. A.A. 2013/14, INGEGNERIA AEROSPAZIALE. Collaboratore del corso
- Informatica. A.A. 2014/15, INGEGNERIA AEROSPAZIALE. Collaboratore del corso
Research
Research groups
Research projects
Projects funded by commercial contracts
- Supporto allo sviluppo di un smart digital water distributor monitoring system , (2024-2025) - Responsabile Scientifico
Commercial Research - Modelli statistici, Data Analytics e Machine Learning , (2022-2023) - Responsabile Scientifico
Commercial Research - “Modelli statistici, data analytics e machine learning (year 2020)”, “Fog computing e opportunistic networking (year 2020)” e “Design e implementazione di funzionalità firmware avanzate (year 2020)” , (2020-2021) - Responsabile Scientifico
Commercial Research - MODELLI STATISTICI, DATA ANALYTICS E MACHINE LEARNING”, “FOG COMPUTING E OPPORTUNISTIC NETWORKING” e “DESIGN E IMPLEMENTAZIONE DI FUNZIONALITÀ FIRMWARE AVANZATE” , (2019-2020) - Responsabile Scientifico
Commercial Research
Supervised PhD students
- Filippo Aisa. Programme in Ingegneria Elettrica, Elettronica E Delle Comunicazioni (cycle 40, 2024-in progress)
- Dana Al Mamlouk. Programme in Urban And Regional Development (cycle 40, 2024-in progress)
- Walter Gallego Gomez. Programme in Ingegneria Informatica E Dei Sistemi (cycle 39, 2023-in progress)
Research subject: Design of bioinformatics algorithms and their implementation on a heterogeneous neuromorphic computing platform
Computer architectures and Computer aided design Data science, Computer vision and AI Life sciences Parallel and distributed systems, Quantum computing Computer architectures and Computer aided design Data science, Computer vision and AI Life sciences Parallel and distributed systems, Quantum computing - Andrea Pignata. Programme in Ingegneria Informatica E Dei Sistemi (cycle 39, 2023-in progress)
Research subject: Development framework for the engineering process of edge-based AIoT sensor solutions
Computer architectures and Computer aided design Data science, Computer vision and AI Computer architectures and Computer aided design Data science, Computer vision and AI - Michelangelo Barocci. Programme in Ingegneria Informatica E Dei Sistemi (cycle 38, 2023-in progress)
Research subject: Design of digital/neuromorphic computing systems and SDK
Computer architectures and Computer aided design Data science, Computer vision and AI Parallel and distributed systems, Quantum computing Computer architectures and Computer aided design Data science, Computer vision and AI Parallel and distributed systems, Quantum computing - Riccardo Pignari. Programme in Ingegneria Informatica E Dei Sistemi (cycle 38, 2022-in progress)
Research subject: New computational paradigms for neuromorphic hardware
Computer architectures and Computer aided design Data science, Computer vision and AI Parallel and distributed systems, Quantum computing Computer architectures and Computer aided design Data science, Computer vision and AI Parallel and distributed systems, Quantum computing - Evelina Forno. Programme in Ingegneria Informatica E Dei Sistemi (cycle 35, 2019-2023)
Thesis: Study and implementation of new computational paradigms exploiting neuromorphic hardware architectures
Publications
Works published during the Ph.D. View all publications in Porto@Iris
- Urgese, Gianvito; Paciello, Giulia; Acquaviva, Andrea; Ficarra, Elisa (2016)
isomiR-SEA: An RNA-Seq analysis tool for miRNAs/isomiRs expression level profiling and miRNA-mRNA interaction sites evaluation. In: BMC BIOINFORMATICS, vol. 17. ISSN 1471-2105
Contributo su Rivista - Urgese, Gianvito; Barchi, Francesco; Macii, Enrico; Acquaviva, Andrea (2015)
Top-down profiling methodology and new Partition and Placement tool to improve Spiking Neural Network simulations on a massively many-core neuromorphic platform. In: 10th SICC International Tutorial Workshop "Topics in nonlinear dynamics". Nonlinear Dynamics in Computational Neuroscience: from Physics and Biology to ICT, Turin (IT), September 7-9, 2015
Contributo in Atti di Convegno (Proceeding) - Causapruno, Giovanni; Urgese, Gianvito; Vacca, Marco; Graziano, Mariagrazia; Zamboni, ... (2015)
Protein Alignment Systolic Array Throughput Optimization. In: IEEE TRANSACTIONS ON VERY LARGE SCALE INTEGRATION (VLSI) SYSTEMS, vol. 23, pp. 68-77. ISSN 1063-8210
Contributo su Rivista - Urgese, Gianvito; Paciello, Giulia; Ficarra, Elisa; Macii, Enrico; Acquaviva, Andrea (2015)
On the relevance of a complete characterisation of miRNAs, isomiRs and miRNA-mRNA interaction sites through miRNA-specific alignment tools. In: RNAi 2015: Short & Long Non-coding RNAs, 10th International Conference & Exhibition, Oxford (UK), 24-26 March 2015
Contributo in Atti di Convegno (Proceeding) - Vacca, Marco; Graziano, Mariagrazia; Wang, JUAN CHI; Cairo, Fabrizio; Causapruno, ... (2014)
NanoMagnet Logic: an Architectural Level Overview. In: Field Coupled Nanocomputing / S.N., Berlin, Springer, pp. 223-256. ISBN: 978-3-662-43722-3
Contributo in Volume - Urgese, Gianvito; Paciello, Giulia; Isella, C.; Medico, E.; Macii, Enrico; Ficarra, ... (2014)
miR-SEA: miRNA Seed Extension based Aligner Pipeline for NGS Expression Level Extraction. In: 2nd International Work-Conference on Bioinformatics and Biomedical Engineering (IWBBIO 2014), Granada, April 7-9 2014, pp. 1015-1026. ISBN: 9788415814849
Contributo in Atti di Convegno (Proceeding) - Urgese, Gianvito; Paciello, Giulia; Acquaviva, Andrea; Ficarra, Elisa; Graziano, ... (2014)
Dynamic Gap Selector: A Smith Waterman Sequence Alignment Algorithm with Affine Gap Model Optimisation. In: 2nd International Work-Conference on Bioinformatics and Biomedical Engineering (IWBBIO 2014), Granada, April 7-9 2014, pp. 1347-1358. ISBN: 9788415814849
Contributo in Atti di Convegno (Proceeding)